An example data frame, including meta-data for a fake sequence used as example dataset for the function loadBarcodeOre or for the vignettes.
Format
## `example_record` A data frame with 1 row and 25 columns:
- sourceID
Record code
- source
Acronym/name of the database/department from which the record/sequence originates
- phylum, class, order, family, genus, species
Taxonomic classification of the record
- lengthSource
Length of the sequence, in base pairs
- sampleID
Sample code, corresponding to the specimen from which the sequence originates
- identified_by, collected_by, taxNotes, collection_date, note
Character class additional informations on the sample's origin
- db_xref
Generally unused for user's records, include the taxid of the NCBI record (taxid:"00001") separated by a pipe for the corresponding BOLD processID
- NCBI_ID
Accession number of the record on the NCBI database
- institutionStoring
Acronym/name of the institution storing the sample
- altitude, depth
Elevation data
- country
Name of the locality from which the sample originates
- lat, lon
Geographical coordinates, in decimal degrees
- directionPrimers
Gives the type of primers that are shown in the foeld "PCR_primers": "F|R" indicates that the primers' names in the "PCR_primers" separated by a pipe correspond to the forward and revers primers in this order
- PCR_primers
Names of the primers used to amplify the sequence of the record
- note
Additional notes
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